==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 03-APR-07 2YSG . COMPND 2 MOLECULE: SYNTAXIN-BINDING PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,N.TOCHIO,M.SATO,S.KOSHIBA,T.HARADA,S.WATANABE, . 40 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3535.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 16 40.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 22.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 115 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 86.0 -8.0 -5.7 -17.1 2 2 A S + 0 0 144 2,-0.1 2,-0.2 0, 0.0 0, 0.0 0.863 360.0 40.0 -36.3 -52.0 -9.0 -7.8 -14.0 3 3 A S + 0 0 93 1,-0.1 4,-0.0 2,-0.1 0, 0.0 -0.618 58.3 153.8-100.7 161.4 -6.5 -5.8 -12.0 4 4 A G S S+ 0 0 50 -2,-0.2 -1,-0.1 0, 0.0 -2,-0.1 0.375 72.0 32.4-146.6 -64.5 -5.7 -2.1 -12.2 5 5 A S S S+ 0 0 97 3,-0.0 2,-0.1 33,-0.0 -2,-0.1 0.984 101.7 77.0 -69.1 -60.6 -4.3 -0.4 -9.1 6 6 A S S S+ 0 0 102 1,-0.2 -3,-0.0 2,-0.0 0, 0.0 -0.321 79.9 60.8 -55.8 121.3 -2.3 -3.4 -7.7 7 7 A G + 0 0 58 -2,-0.1 -1,-0.2 2,-0.1 -4,-0.0 0.665 64.8 178.2 124.7 48.5 0.9 -3.7 -9.7 8 8 A L - 0 0 45 1,-0.1 30,-0.1 4,-0.1 3,-0.1 -0.379 36.7 -93.2 -77.3 156.7 3.0 -0.6 -9.4 9 9 A P > - 0 0 49 0, 0.0 3,-2.0 0, 0.0 -1,-0.1 -0.364 52.3 -84.8 -69.8 147.0 6.4 -0.2 -11.1 10 10 A Y T 3 S+ 0 0 228 1,-0.2 3,-0.1 -2,-0.1 0, 0.0 -0.305 117.2 31.3 -54.5 120.6 9.5 -1.1 -9.1 11 11 A G T 3 S+ 0 0 14 1,-0.5 16,-2.0 -2,-0.1 17,-0.4 -0.114 98.3 93.0 122.6 -36.5 10.5 2.0 -7.1 12 12 A W E < -A 26 0A 56 -3,-2.0 -1,-0.5 14,-0.2 2,-0.3 -0.523 51.2-167.9 -89.4 158.3 7.1 3.5 -6.4 13 13 A E E -A 25 0A 106 12,-1.9 12,-2.3 -2,-0.2 2,-0.6 -0.922 13.0-146.6-151.5 121.0 5.0 2.8 -3.3 14 14 A E E +A 24 0A 67 -2,-0.3 10,-0.2 10,-0.2 2,-0.2 -0.786 30.7 166.0 -91.9 117.2 1.3 3.7 -2.7 15 15 A A E -A 23 0A 29 8,-2.0 8,-2.3 -2,-0.6 2,-0.3 -0.637 25.6-127.3-120.7 179.3 0.6 4.5 1.0 16 16 A Y E -A 22 0A 137 6,-0.2 6,-0.2 -2,-0.2 5,-0.1 -0.922 15.4-126.5-130.6 155.7 -2.2 6.1 3.0 17 17 A T - 0 0 51 4,-1.9 3,-0.1 -2,-0.3 6,-0.0 -0.377 39.5 -93.7 -93.4 174.8 -2.4 8.9 5.5 18 18 A A S S+ 0 0 110 1,-0.2 -1,-0.1 -2,-0.1 -2,-0.0 0.695 128.2 51.6 -60.8 -18.0 -3.9 9.0 9.1 19 19 A D S S- 0 0 148 2,-0.1 -1,-0.2 0, 0.0 -3,-0.0 0.868 120.4-105.1 -86.1 -42.2 -7.1 10.2 7.4 20 20 A G S S+ 0 0 44 1,-0.3 -2,-0.1 -3,-0.1 0, 0.0 0.057 72.3 133.2 139.9 -26.8 -7.3 7.5 4.7 21 21 A I - 0 0 103 -5,-0.1 -4,-1.9 1,-0.1 2,-0.4 -0.027 47.5-133.6 -50.4 157.6 -6.3 9.3 1.5 22 22 A K E +A 16 0A 94 -6,-0.2 2,-0.3 -8,-0.0 -6,-0.2 -0.953 24.6 176.4-122.3 139.6 -3.8 7.5 -0.7 23 23 A Y E -A 15 0A 63 -8,-2.3 -8,-2.0 -2,-0.4 2,-0.5 -0.931 27.1-120.3-137.9 161.0 -0.7 8.9 -2.4 24 24 A F E +AB 14 33A 11 9,-2.0 9,-3.0 -2,-0.3 2,-0.4 -0.902 30.6 177.8-107.7 125.8 2.2 7.7 -4.5 25 25 A I E -AB 13 32A 43 -12,-2.3 -12,-1.9 -2,-0.5 2,-0.3 -0.977 16.7-143.4-129.1 140.9 5.8 8.0 -3.3 26 26 A N E -A 12 0A 12 5,-2.0 -14,-0.2 -2,-0.4 5,-0.1 -0.712 6.8-161.4-101.7 152.8 9.1 6.9 -4.8 27 27 A H S S+ 0 0 120 -16,-2.0 -1,-0.1 -2,-0.3 -15,-0.1 0.738 92.4 50.2-100.1 -31.8 12.2 5.6 -3.0 28 28 A V S S+ 0 0 107 -17,-0.4 -16,-0.1 1,-0.2 -1,-0.0 0.834 128.5 23.8 -75.6 -34.0 14.7 6.2 -5.8 29 29 A T S S- 0 0 78 -18,-0.2 -1,-0.2 2,-0.1 -2,-0.1 0.443 94.2-141.5-108.7 -5.3 13.6 9.8 -6.3 30 30 A Q + 0 0 166 1,-0.2 2,-0.4 -5,-0.0 -3,-0.2 0.895 50.3 146.9 42.4 51.4 12.2 10.3 -2.8 31 31 A T - 0 0 66 -5,-0.1 -5,-2.0 2,-0.0 2,-0.6 -0.934 44.4-140.5-120.5 142.0 9.3 12.3 -4.3 32 32 A T E +B 25 0A 96 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.889 36.8 146.7-104.9 119.5 5.7 12.6 -3.2 33 33 A S E -B 24 0A 39 -9,-3.0 -9,-2.0 -2,-0.6 2,-0.8 -0.980 45.8-124.2-148.0 157.4 3.1 12.8 -6.0 34 34 A W + 0 0 172 -2,-0.3 2,-0.3 -11,-0.2 -11,-0.1 -0.829 64.6 99.1-108.4 94.9 -0.5 11.6 -6.6 35 35 A I - 0 0 92 -2,-0.8 -2,-0.1 2,-0.0 0, 0.0 -0.963 68.5-112.3-161.7 174.0 -0.6 9.5 -9.8 36 36 A H - 0 0 84 -2,-0.3 2,-2.1 2,-0.1 -2,-0.0 -0.736 24.8-166.6-121.8 82.4 -0.8 6.0 -11.1 37 37 A P + 0 0 34 0, 0.0 2,-0.3 0, 0.0 -25,-0.1 -0.446 43.1 123.8 -69.8 80.0 2.5 5.3 -13.0 38 38 A V - 0 0 65 -2,-2.1 2,-0.4 -30,-0.1 -2,-0.1 -0.999 39.6-165.1-145.0 139.2 1.4 2.1 -14.8 39 39 A M 0 0 182 -2,-0.3 0, 0.0 1,-0.1 0, 0.0 -0.948 360.0 360.0-126.1 146.0 1.3 1.0 -18.4 40 40 A S 0 0 165 -2,-0.4 -1,-0.1 0, 0.0 0, 0.0 0.649 360.0 360.0-120.7 360.0 -0.4 -1.8 -20.1