==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 03-APR-07 2YSI . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR S.OHNISHI,H.LI,S.KOSHIBA,T.HARADA,S.WATANABE,T.KIGAWA, . 40 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3731.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 32.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 22.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 115 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -73.6 -15.2 -11.4 -1.3 2 2 A S + 0 0 140 3,-0.0 2,-0.2 0, 0.0 0, 0.0 0.905 360.0 30.4 -41.1 -57.0 -13.9 -14.8 -0.3 3 3 A S S S+ 0 0 101 1,-0.0 0, 0.0 2,-0.0 0, 0.0 -0.470 84.6 77.7-100.3 173.8 -11.6 -15.0 -3.3 4 4 A G - 0 0 76 -2,-0.2 2,-0.4 1,-0.1 -1,-0.0 0.893 50.3-179.9 89.7 83.8 -9.8 -12.3 -5.2 5 5 A S - 0 0 118 1,-0.2 -1,-0.1 0, 0.0 -3,-0.0 -0.938 29.9-139.7-119.7 139.4 -6.7 -11.0 -3.4 6 6 A S - 0 0 117 -2,-0.4 2,-0.6 1,-0.2 -1,-0.2 0.968 34.3-166.6 -57.2 -58.0 -4.3 -8.3 -4.6 7 7 A G + 0 0 53 2,-0.0 2,-0.4 0, 0.0 -1,-0.2 -0.903 52.8 27.4 111.4-111.8 -1.2 -10.0 -3.5 8 8 A T - 0 0 139 -2,-0.6 2,-0.3 0, 0.0 0, 0.0 -0.769 67.6-169.0 -94.9 133.9 2.1 -8.0 -3.4 9 9 A E - 0 0 105 -2,-0.4 -2,-0.0 1,-0.2 4,-0.0 -0.829 28.4 -90.8-119.9 159.1 1.9 -4.3 -2.9 10 10 A E - 0 0 72 -2,-0.3 -1,-0.2 1,-0.1 26,-0.0 0.121 50.4 -91.6 -54.9 178.0 4.5 -1.5 -3.2 11 11 A I S S+ 0 0 110 2,-0.1 16,-0.8 15,-0.0 -1,-0.1 0.354 96.0 110.2 -77.2 7.6 6.6 -0.4 -0.2 12 12 A W E -A 26 0A 34 14,-0.2 2,-0.4 15,-0.1 14,-0.2 -0.369 66.5-125.9 -81.0 162.6 3.9 2.2 0.5 13 13 A V E -A 25 0A 66 12,-2.3 12,-2.0 -2,-0.1 2,-0.5 -0.891 15.5-123.0-113.6 142.4 1.5 2.0 3.5 14 14 A E E +A 24 0A 145 -2,-0.4 2,-0.3 10,-0.2 10,-0.2 -0.713 46.2 149.2 -85.9 123.6 -2.3 2.1 3.4 15 15 A N E -A 23 0A 57 8,-2.5 8,-2.2 -2,-0.5 2,-0.4 -0.867 36.2-135.2-143.5 175.9 -3.8 4.9 5.5 16 16 A K E -A 22 0A 122 6,-0.3 6,-0.3 -2,-0.3 -2,-0.0 -0.945 24.6-121.2-144.0 119.0 -6.8 7.3 5.6 17 17 A T > - 0 0 23 4,-3.0 3,-0.9 -2,-0.4 4,-0.4 -0.027 33.5-105.6 -52.0 158.7 -6.7 11.0 6.4 18 18 A P T 3 S+ 0 0 134 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 0.383 119.6 59.2 -69.7 6.3 -8.7 12.3 9.4 19 19 A D T 3 S- 0 0 132 2,-0.2 -2,-0.1 0, 0.0 -3,-0.0 0.710 126.1 -88.4-104.5 -31.1 -11.2 13.6 6.8 20 20 A G S < S+ 0 0 45 -3,-0.9 2,-0.4 1,-0.3 -4,-0.0 0.661 82.9 122.7 123.6 40.1 -12.2 10.4 5.1 21 21 A K - 0 0 92 -4,-0.4 -4,-3.0 2,-0.0 2,-0.4 -0.985 53.4-133.9-134.6 124.3 -9.7 9.8 2.3 22 22 A V E +A 16 0A 67 -2,-0.4 -6,-0.3 -6,-0.3 2,-0.2 -0.603 35.1 168.1 -78.0 128.5 -7.5 6.8 1.8 23 23 A Y E -A 15 0A 62 -8,-2.2 -8,-2.5 -2,-0.4 2,-0.4 -0.759 29.9-118.0-131.6 177.7 -3.9 7.6 0.9 24 24 A Y E -AB 14 33A 49 9,-1.8 9,-2.9 -2,-0.2 2,-0.5 -0.978 16.6-157.4-125.8 134.1 -0.5 5.9 0.6 25 25 A Y E -AB 13 32A 84 -12,-2.0 -12,-2.3 -2,-0.4 2,-0.4 -0.937 12.9-139.6-113.9 126.9 2.6 6.7 2.6 26 26 A N E > -A 12 0A 12 5,-1.7 4,-1.1 -2,-0.5 5,-0.3 -0.684 5.6-160.8 -86.1 132.3 6.1 5.8 1.3 27 27 A A T 4 S+ 0 0 61 -16,-0.8 -1,-0.1 -2,-0.4 -15,-0.1 0.578 91.9 53.3 -85.2 -11.1 8.6 4.5 3.9 28 28 A R T 4 S+ 0 0 202 3,-0.1 -1,-0.1 -17,-0.1 -16,-0.0 0.876 126.3 18.6 -88.9 -45.3 11.5 5.3 1.6 29 29 A T T 4 S- 0 0 60 2,-0.1 -2,-0.2 0, 0.0 3,-0.1 0.598 94.6-134.9 -99.9 -16.5 10.7 9.0 0.9 30 30 A R < + 0 0 185 -4,-1.1 2,-0.2 1,-0.2 -3,-0.2 0.874 58.8 135.4 63.1 38.2 8.4 9.4 3.9 31 31 A E - 0 0 123 -5,-0.3 -5,-1.7 2,-0.0 2,-0.4 -0.605 52.3-124.7-111.5 173.4 5.9 11.3 1.8 32 32 A S E +B 25 0A 83 -7,-0.2 2,-0.3 -2,-0.2 -7,-0.2 -0.980 32.2 160.6-125.6 126.4 2.1 11.1 1.4 33 33 A A E -B 24 0A 35 -9,-2.9 -9,-1.8 -2,-0.4 -2,-0.0 -0.973 40.9-132.9-147.6 129.1 0.3 10.5 -1.9 34 34 A W S S+ 0 0 135 -2,-0.3 2,-0.2 -11,-0.3 -1,-0.2 0.912 96.4 27.1 -41.3 -59.1 -3.3 9.4 -2.6 35 35 A T S S- 0 0 104 -12,-0.1 -11,-0.1 -3,-0.1 -12,-0.0 -0.686 88.6-111.2-107.0 161.4 -2.0 6.9 -5.2 36 36 A K - 0 0 42 -2,-0.2 -2,-0.0 1,-0.1 -11,-0.0 -0.700 32.6-114.3 -93.9 143.1 1.3 5.0 -5.5 37 37 A P - 0 0 63 0, 0.0 2,-0.2 0, 0.0 3,-0.2 -0.217 27.5-123.8 -69.8 162.2 3.8 5.8 -8.3 38 38 A D S S+ 0 0 157 1,-0.2 0, 0.0 2,-0.0 0, 0.0 -0.700 81.3 43.8-107.5 160.7 4.7 3.3 -11.1 39 39 A G 0 0 86 -2,-0.2 -1,-0.2 1,-0.2 0, 0.0 0.903 360.0 360.0 75.1 42.5 8.1 1.9 -12.1 40 40 A V 0 0 125 -3,-0.2 -1,-0.2 0, 0.0 -2,-0.0 -0.489 360.0 360.0 -98.8 360.0 9.4 1.3 -8.6