==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 03-APR-07 2YSR . COMPND 2 MOLECULE: DEP DOMAIN-CONTAINING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,F.HAYAHSI,S.YOKOYAMA,RIKEN STRUCTURAL . 105 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7993.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 58.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 6 5.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 35.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 136 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.2 34.2 -8.7 -1.0 2 2 A S - 0 0 123 2,-0.0 2,-0.6 0, 0.0 0, 0.0 -0.967 360.0-155.1-145.2 125.0 33.4 -5.3 -2.4 3 3 A S + 0 0 131 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.880 36.4 134.6-103.7 120.6 31.4 -2.4 -0.9 4 4 A G + 0 0 73 -2,-0.6 2,-0.2 2,-0.0 -1,-0.1 -0.201 20.8 167.3-161.1 58.7 29.8 0.0 -3.4 5 5 A S - 0 0 93 1,-0.0 2,-0.5 2,-0.0 3,-0.2 -0.479 26.1-139.1 -78.8 148.7 26.1 0.8 -2.5 6 6 A S S S- 0 0 105 1,-0.2 5,-0.2 -2,-0.2 -2,-0.0 -0.939 76.8 -14.5-113.9 122.9 24.3 3.7 -4.2 7 7 A G S > S+ 0 0 47 -2,-0.5 4,-3.2 3,-0.1 5,-0.3 0.896 72.9 171.8 56.0 42.9 22.0 6.0 -2.2 8 8 A Y H > S+ 0 0 146 1,-0.2 4,-3.1 2,-0.2 5,-0.2 0.873 73.9 57.4 -49.2 -41.6 21.9 3.5 0.7 9 9 A R H > S+ 0 0 189 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.963 112.9 36.8 -54.8 -58.0 20.1 6.1 2.7 10 10 A A H > S+ 0 0 57 1,-0.2 4,-2.1 2,-0.2 -2,-0.2 0.908 116.6 54.1 -62.5 -43.4 17.2 6.5 0.2 11 11 A T H X S+ 0 0 71 -4,-3.2 4,-2.6 1,-0.2 -1,-0.2 0.906 105.0 54.8 -57.9 -44.1 17.3 2.7 -0.6 12 12 A K H X S+ 0 0 135 -4,-3.1 4,-3.2 -5,-0.3 -1,-0.2 0.955 107.6 48.5 -54.6 -55.8 16.9 1.9 3.1 13 13 A L H X S+ 0 0 39 -4,-1.7 4,-2.9 1,-0.2 5,-0.3 0.953 111.6 48.7 -49.5 -60.1 13.8 4.0 3.5 14 14 A W H X S+ 0 0 78 -4,-2.1 4,-3.0 1,-0.2 5,-0.3 0.917 114.0 46.9 -46.8 -52.5 12.1 2.5 0.4 15 15 A N H X S+ 0 0 92 -4,-2.6 4,-2.7 2,-0.2 -1,-0.2 0.928 111.7 51.3 -57.2 -48.2 12.9 -1.0 1.5 16 16 A E H X S+ 0 0 139 -4,-3.2 4,-2.0 -5,-0.2 -2,-0.2 0.957 116.0 39.9 -54.3 -56.5 11.7 -0.3 5.1 17 17 A V H X S+ 0 0 13 -4,-2.9 4,-3.2 1,-0.2 3,-0.4 0.971 116.1 49.2 -58.2 -58.2 8.4 1.1 3.9 18 18 A T H X S+ 0 0 9 -4,-3.0 4,-2.8 -5,-0.3 5,-0.2 0.859 110.7 53.2 -50.3 -38.8 7.8 -1.5 1.2 19 19 A T H X S+ 0 0 59 -4,-2.7 4,-1.4 -5,-0.3 5,-0.3 0.905 112.6 42.5 -64.7 -42.7 8.6 -4.2 3.7 20 20 A S H X S+ 0 0 36 -4,-2.0 4,-2.8 -3,-0.4 -2,-0.2 0.904 118.0 45.9 -70.7 -42.8 6.0 -2.9 6.1 21 21 A F H < S+ 0 0 13 -4,-3.2 4,-0.3 2,-0.2 -2,-0.2 0.975 107.6 55.3 -64.2 -57.2 3.4 -2.3 3.4 22 22 A R H < S+ 0 0 133 -4,-2.8 -1,-0.2 -5,-0.2 -2,-0.2 0.892 124.0 27.1 -41.9 -51.7 3.9 -5.7 1.6 23 23 A A H < S+ 0 0 70 -4,-1.4 -2,-0.2 -5,-0.2 -1,-0.2 0.978 87.5 116.0 -77.2 -64.1 3.2 -7.5 4.9 24 24 A G S < S- 0 0 33 -4,-2.8 -3,-0.1 -5,-0.3 -1,-0.1 0.009 85.1 -3.7 33.0-110.0 1.0 -5.0 6.8 25 25 A M - 0 0 125 -4,-0.3 3,-0.1 1,-0.1 24,-0.0 -0.781 59.9-134.9-110.4 154.4 -2.2 -6.9 7.1 26 26 A P S S- 0 0 115 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.945 80.6 -22.1 -69.8 -50.9 -3.2 -10.3 5.8 27 27 A L - 0 0 95 2,-0.0 2,-0.4 14,-0.0 12,-0.1 -0.988 55.7-143.5-160.0 156.8 -6.7 -9.4 4.5 28 28 A R - 0 0 62 -2,-0.3 2,-0.9 12,-0.2 -3,-0.0 -0.968 22.3-120.5-129.4 144.2 -9.4 -6.8 4.9 29 29 A K + 0 0 194 -2,-0.4 2,-0.3 12,-0.0 10,-0.1 -0.730 40.8 173.3 -86.2 107.6 -13.2 -7.0 4.8 30 30 A H - 0 0 17 -2,-0.9 2,-0.1 8,-0.3 10,-0.1 -0.844 41.0 -89.3-115.7 152.5 -14.5 -4.7 2.1 31 31 A R + 0 0 205 -2,-0.3 2,-0.3 2,-0.0 -1,-0.0 -0.369 55.1 161.7 -60.3 127.4 -18.0 -4.3 0.6 32 32 A Q - 0 0 65 -2,-0.1 -1,-0.0 1,-0.1 -2,-0.0 -0.882 26.4-179.1-155.1 118.0 -18.6 -6.7 -2.2 33 33 A H S S+ 0 0 180 -2,-0.3 -1,-0.1 2,-0.0 2,-0.1 0.876 74.4 57.0 -82.4 -41.7 -21.9 -7.8 -3.8 34 34 A F S S- 0 0 130 1,-0.1 3,-0.1 4,-0.0 0, 0.0 -0.288 74.2-137.6 -84.6 173.1 -20.3 -10.2 -6.4 35 35 A K S S+ 0 0 188 1,-0.1 -1,-0.1 -2,-0.1 -2,-0.0 0.551 80.2 98.6-106.1 -14.4 -18.0 -13.1 -5.8 36 36 A K S S+ 0 0 172 2,-0.1 2,-0.3 0, 0.0 -1,-0.1 0.856 96.0 23.3 -39.7 -45.2 -15.6 -12.4 -8.6 37 37 A Y + 0 0 50 1,-0.1 48,-0.0 -3,-0.1 63,-0.0 -0.785 59.6 133.3-122.4 166.3 -13.3 -10.7 -6.1 38 38 A G S S+ 0 0 23 -2,-0.3 -8,-0.3 -9,-0.0 -1,-0.1 0.188 71.8 60.2-176.5 -40.3 -12.8 -11.0 -2.3 39 39 A N S S+ 0 0 127 -12,-0.1 2,-0.1 -10,-0.1 -11,-0.1 0.377 93.4 89.5 -87.1 4.1 -9.2 -11.3 -1.4 40 40 A C - 0 0 15 62,-0.1 2,-0.3 -13,-0.1 -12,-0.2 -0.394 64.6-145.2 -94.7 174.5 -8.5 -7.9 -3.0 41 41 A F E -A 101 0A 43 60,-0.8 60,-1.7 -2,-0.1 2,-0.1 -0.999 20.0-109.2-145.1 141.2 -8.7 -4.4 -1.6 42 42 A T E > -A 100 0A 41 -2,-0.3 4,-1.4 58,-0.2 58,-0.2 -0.437 28.7-122.3 -69.8 138.9 -9.8 -1.0 -2.9 43 43 A A H > S+ 0 0 0 56,-2.3 4,-2.1 1,-0.2 3,-0.3 0.895 108.5 63.9 -45.4 -48.6 -7.0 1.5 -3.4 44 44 A G H >> S+ 0 0 17 1,-0.2 4,-1.1 2,-0.2 3,-0.9 0.922 99.3 49.5 -41.2 -66.8 -8.7 3.9 -1.1 45 45 A E H >> S+ 0 0 93 1,-0.3 4,-2.0 -3,-0.2 3,-0.8 0.873 109.6 54.3 -41.8 -47.0 -8.3 1.7 2.0 46 46 A A H 3X S+ 0 0 5 -4,-1.4 4,-3.3 -3,-0.3 5,-0.5 0.904 95.3 67.2 -56.2 -44.3 -4.6 1.3 1.1 47 47 A V H < S+ 0 0 3 -4,-2.4 3,-1.2 -3,-0.5 7,-0.6 0.977 112.5 44.4 -70.1 -58.0 4.3 7.0 6.4 55 55 A R H 3< S+ 0 0 92 -4,-2.5 6,-0.2 1,-0.3 -2,-0.2 0.889 103.3 67.5 -53.9 -42.4 3.5 9.7 8.9 56 56 A N H 3< S+ 0 0 123 -4,-2.4 -1,-0.3 -5,-0.3 -2,-0.2 0.854 93.5 74.4 -46.7 -39.7 4.3 7.3 11.7 57 57 A N S << S- 0 0 78 -3,-1.2 4,-0.4 -4,-0.8 -3,-0.0 -0.023 85.3-127.7 -67.3 177.4 7.9 7.4 10.6 58 58 A S S S+ 0 0 109 2,-0.1 -1,-0.1 3,-0.1 -4,-0.0 0.798 100.9 61.3 -97.1 -38.2 10.2 10.4 11.2 59 59 A N S S+ 0 0 103 1,-0.2 -4,-0.1 2,-0.1 -5,-0.1 0.944 121.2 24.5 -53.8 -53.3 11.4 10.9 7.6 60 60 A F S > S+ 0 0 44 -6,-0.4 4,-0.6 3,-0.0 3,-0.4 0.877 96.8 178.8 -80.5 -41.2 7.9 11.7 6.4 61 61 A G T >4 - 0 0 7 -7,-0.6 3,-1.4 -4,-0.4 -4,-0.2 0.110 54.5 -58.1 61.6 177.7 6.5 12.8 9.7 62 62 A P T 34 S+ 0 0 102 0, 0.0 -1,-0.2 0, 0.0 -7,-0.1 0.549 122.8 83.8 -69.7 -6.7 3.0 14.0 10.3 63 63 A E T 34 + 0 0 166 -3,-0.4 -2,-0.2 -8,-0.1 2,-0.1 0.806 67.8 97.9 -66.4 -29.6 3.7 16.7 7.7 64 64 A V << - 0 0 6 -3,-1.4 2,-0.2 -4,-0.6 -9,-0.1 -0.399 63.3-157.7 -63.8 131.0 2.8 14.2 4.9 65 65 A T >> - 0 0 61 -2,-0.1 4,-1.4 1,-0.1 3,-0.9 -0.674 32.9 -98.9-109.0 164.7 -0.8 14.6 3.7 66 66 A R H >> S+ 0 0 121 1,-0.3 4,-1.8 -2,-0.2 3,-0.6 0.900 121.5 61.5 -45.0 -50.2 -3.1 12.2 1.9 67 67 A Q H 3> S+ 0 0 123 1,-0.3 4,-2.0 2,-0.2 -1,-0.3 0.890 101.9 52.0 -44.6 -48.2 -2.2 13.8 -1.4 68 68 A Q H <> S+ 0 0 107 -3,-0.9 4,-2.9 1,-0.2 -1,-0.3 0.889 104.2 58.0 -57.7 -41.4 1.4 12.8 -0.9 69 69 A T H X S+ 0 0 35 -4,-2.9 3,-2.6 1,-0.2 4,-1.0 0.936 105.1 63.1 -64.4 -48.0 4.0 8.0 -3.7 73 73 A L H >X S+ 0 0 2 -4,-3.2 4,-1.7 1,-0.3 3,-0.6 0.863 90.4 68.9 -44.1 -42.9 1.7 5.0 -4.3 74 74 A R H 3X S+ 0 0 79 -4,-1.5 4,-1.5 1,-0.3 -1,-0.3 0.841 98.2 51.6 -46.4 -37.8 2.1 5.6 -8.0 75 75 A K H <> S+ 0 0 93 -3,-2.6 4,-3.0 -4,-0.5 -1,-0.3 0.899 102.4 59.1 -68.0 -41.7 5.8 4.5 -7.6 76 76 A F H <<>S+ 0 0 1 -4,-1.0 5,-3.2 -3,-0.6 6,-0.4 0.944 108.0 44.3 -52.0 -54.6 4.7 1.3 -5.8 77 77 A L H ><5S+ 0 0 2 -4,-1.7 3,-1.1 1,-0.2 13,-0.9 0.871 114.1 51.5 -59.4 -38.1 2.7 0.1 -8.8 78 78 A K H 3<5S+ 0 0 98 -4,-1.5 -1,-0.2 -5,-0.3 -2,-0.2 0.888 106.2 53.0 -66.7 -40.0 5.5 1.1 -11.1 79 79 A N T 3<5S- 0 0 84 -4,-3.0 -1,-0.3 -5,-0.1 -2,-0.2 0.348 121.8-110.0 -77.6 8.1 8.1 -0.8 -9.0 80 80 A H T < 5S+ 0 0 75 -3,-1.1 -3,-0.2 -5,-0.2 3,-0.2 0.827 80.2 133.9 66.8 31.9 5.8 -3.8 -9.4 81 81 A V S