==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 24-FEB-05 1YYC . COMPND 2 MOLECULE: PUTATIVE LATE EMBRYOGENESIS ABUNDANT PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS (CESG),J.SONG, . 174 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9739.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 123 70.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 54 31.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 31 17.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 1 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 83 0, 0.0 127,-0.1 0, 0.0 128,-0.0 0.000 360.0 360.0 360.0-150.1 23.5 11.2 -1.3 2 2 A H + 0 0 148 1,-0.1 2,-2.4 125,-0.1 126,-0.1 0.628 360.0 95.7-101.0 -15.7 23.1 11.1 -5.0 3 3 A H + 0 0 70 124,-0.5 2,-0.3 125,-0.2 -1,-0.1 -0.465 66.8 92.2 -80.2 72.8 19.5 12.4 -5.2 4 4 A H + 0 0 129 -2,-2.4 3,-0.1 1,-0.2 123,-0.0 -0.956 65.9 35.2-157.1 154.1 20.3 16.0 -5.8 5 5 A H S S+ 0 0 161 -2,-0.3 2,-0.3 1,-0.2 -1,-0.2 0.993 77.7 123.8 59.9 64.7 20.8 18.2 -8.9 6 6 A H + 0 0 109 -3,-0.1 2,-0.4 4,-0.1 -1,-0.2 -0.884 32.7 179.7-149.4 118.5 18.2 16.6 -11.2 7 7 A H + 0 0 169 -2,-0.3 2,-0.3 -3,-0.1 4,-0.1 -0.759 30.2 126.1-132.6 89.6 15.5 18.7 -12.7 8 8 A L S S- 0 0 111 -2,-0.4 4,-0.1 2,-0.3 -1,-0.0 -0.829 108.3 -35.0-137.2 94.0 13.1 17.0 -14.9 9 9 A E S S- 0 0 132 -2,-0.3 2,-2.0 1,-0.3 6,-0.1 0.845 111.4 -71.2 52.4 41.9 9.7 17.8 -13.5 10 10 A A S S- 0 0 55 4,-0.1 -2,-0.3 5,-0.0 2,-0.3 -0.553 117.4 -9.2 74.4 -67.5 11.6 17.6 -10.2 11 11 A S > - 0 0 38 -2,-2.0 4,-2.7 -4,-0.1 5,-0.2 -0.876 62.9-142.3-158.9 122.4 11.9 13.8 -10.5 12 12 A A H > S+ 0 0 45 -2,-0.3 4,-3.2 1,-0.2 5,-0.2 0.874 103.9 46.8 -55.6 -43.0 10.0 11.8 -13.2 13 13 A D H > S+ 0 0 99 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.950 113.3 47.2 -63.8 -50.0 9.4 8.9 -10.8 14 14 A E H > S+ 0 0 21 1,-0.2 4,-1.0 111,-0.2 80,-0.2 0.892 117.8 45.4 -59.2 -40.7 8.2 11.2 -7.9 15 15 A K H X S+ 0 0 53 -4,-2.7 4,-1.6 2,-0.2 3,-0.5 0.945 110.7 49.4 -70.3 -53.8 6.0 12.9 -10.5 16 16 A V H X S+ 0 0 58 -4,-3.2 4,-1.9 1,-0.2 -2,-0.2 0.789 105.1 59.9 -62.7 -28.0 4.5 9.9 -12.3 17 17 A V H X S+ 0 0 23 -4,-2.0 4,-3.1 -5,-0.2 -1,-0.2 0.923 105.1 48.7 -62.9 -41.2 3.6 8.3 -9.0 18 18 A E H X S+ 0 0 126 -4,-1.0 4,-2.7 -3,-0.5 -2,-0.2 0.865 106.3 58.3 -66.9 -36.3 1.4 11.3 -8.2 19 19 A E H X S+ 0 0 96 -4,-1.6 4,-1.2 2,-0.2 -1,-0.2 0.948 113.7 37.3 -53.3 -54.0 -0.2 11.0 -11.7 20 20 A K H X S+ 0 0 113 -4,-1.9 4,-2.7 1,-0.2 3,-0.3 0.925 114.7 55.1 -65.9 -47.9 -1.3 7.4 -10.9 21 21 A A H X S+ 0 0 9 -4,-3.1 4,-3.3 1,-0.2 5,-0.2 0.869 102.6 56.5 -56.7 -43.5 -2.2 8.2 -7.3 22 22 A S H X S+ 0 0 76 -4,-2.7 4,-1.3 2,-0.2 -1,-0.2 0.913 112.0 41.4 -57.2 -45.8 -4.5 11.0 -8.3 23 23 A V H X S+ 0 0 104 -4,-1.2 4,-1.8 -3,-0.3 -2,-0.2 0.918 114.7 52.2 -70.0 -42.0 -6.6 8.8 -10.5 24 24 A I H X S+ 0 0 25 -4,-2.7 4,-2.3 1,-0.2 -2,-0.2 0.931 107.9 51.2 -58.2 -47.0 -6.4 6.0 -8.0 25 25 A S H X S+ 0 0 60 -4,-3.3 4,-2.3 1,-0.2 -1,-0.2 0.821 105.7 56.8 -62.0 -30.9 -7.6 8.3 -5.2 26 26 A S H X S+ 0 0 74 -4,-1.3 4,-1.6 -5,-0.2 -1,-0.2 0.911 109.0 44.8 -67.7 -40.2 -10.6 9.3 -7.4 27 27 A L H X S+ 0 0 62 -4,-1.8 4,-1.1 2,-0.2 129,-0.2 0.857 113.1 51.1 -72.7 -33.6 -11.7 5.7 -7.8 28 28 A L H X S+ 0 0 20 -4,-2.3 4,-1.7 1,-0.2 -2,-0.2 0.905 108.1 54.0 -65.9 -38.7 -11.2 5.2 -4.0 29 29 A D H X S+ 0 0 108 -4,-2.3 4,-1.4 1,-0.2 5,-0.2 0.837 101.4 57.2 -66.3 -34.4 -13.3 8.3 -3.4 30 30 A K H X S+ 0 0 90 -4,-1.6 4,-0.8 1,-0.2 -1,-0.2 0.881 110.6 45.6 -64.1 -33.5 -16.2 7.0 -5.5 31 31 A A H X S+ 0 0 1 -4,-1.1 4,-2.4 -3,-0.2 -2,-0.2 0.828 100.9 68.8 -77.6 -32.5 -16.3 4.1 -3.2 32 32 A K H X S+ 0 0 141 -4,-1.7 4,-1.3 1,-0.2 -2,-0.2 0.924 106.5 36.8 -53.5 -52.9 -16.0 6.2 -0.1 33 33 A G H X S+ 0 0 45 -4,-1.4 4,-1.0 1,-0.2 5,-0.3 0.783 114.3 59.6 -72.2 -24.9 -19.5 7.8 -0.4 34 34 A F H X>S+ 0 0 39 -4,-0.8 4,-2.2 -5,-0.2 5,-1.2 0.873 101.2 53.3 -68.8 -40.1 -20.8 4.4 -1.7 35 35 A F H <5S+ 0 0 45 -4,-2.4 4,-0.2 3,-0.2 -2,-0.2 0.918 100.3 62.3 -62.3 -45.6 -19.7 2.6 1.6 36 36 A A H <5S+ 0 0 77 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.865 123.8 10.7 -51.7 -48.7 -21.6 5.0 3.8 37 37 A E H <5S+ 0 0 142 -4,-1.0 3,-0.3 -3,-0.1 4,-0.3 0.818 134.1 39.2-104.6 -36.1 -25.0 4.3 2.5 38 38 A K T >X5S+ 0 0 81 -4,-2.2 4,-1.7 -5,-0.3 3,-1.5 0.945 114.6 47.1 -87.0 -43.5 -24.8 1.3 0.3 39 39 A L T 34 S+ 0 0 0 -2,-0.3 4,-2.3 -32,-0.3 -1,-0.2 0.201 102.0 109.1 72.2 -16.8 11.4 3.6 2.7 121 121 A Y H > S+ 0 0 69 -59,-0.3 4,-2.8 1,-0.2 5,-0.2 0.850 72.4 56.0 -51.5 -39.9 11.7 3.1 -1.0 122 122 A S H > S+ 0 0 0 -4,-0.4 4,-1.8 2,-0.2 -1,-0.2 0.952 109.4 41.1 -65.5 -51.8 9.5 6.1 -1.5 123 123 A I H >>S+ 0 0 27 1,-0.2 5,-2.9 2,-0.2 4,-2.1 0.840 115.5 55.4 -67.3 -28.9 11.6 8.6 0.6 124 124 A A H <5S+ 0 0 1 -4,-2.3 -2,-0.2 3,-0.2 -1,-0.2 0.943 107.9 44.9 -66.4 -50.7 14.7 7.0 -1.1 125 125 A V H <5S+ 0 0 20 -4,-2.8 -111,-0.2 -5,-0.1 -1,-0.2 0.829 117.3 48.5 -65.8 -30.2 13.6 7.6 -4.7 126 126 A S H <5S- 0 0 18 -4,-1.8 -2,-0.2 -5,-0.2 -3,-0.2 0.990 143.5 -42.1 -70.7 -73.4 12.6 11.1 -3.7 127 127 A L T <5 - 0 0 94 -4,-2.1 -124,-0.5 -5,-0.1 -3,-0.2 0.690 65.3-138.9-125.4 -41.3 15.6 12.4 -1.8 128 128 A M < - 0 0 49 -5,-2.9 -125,-0.2 -8,-0.1 -4,-0.1 0.897 9.4-141.2 64.2 100.0 16.9 9.6 0.5 129 129 A K - 0 0 94 1,-0.1 2,-0.1 -128,-0.0 -5,-0.0 0.948 53.5 -80.2 -48.9 -63.8 17.9 11.3 3.7 130 130 A D - 0 0 85 -129,-0.0 -1,-0.1 41,-0.0 2,-0.1 -0.196 48.1-103.2 151.8 107.9 21.1 9.2 4.3 131 131 A M - 0 0 6 -2,-0.1 2,-0.1 40,-0.1 43,-0.0 -0.366 47.0-172.2 -53.1 123.6 20.6 5.8 5.8 132 132 A C - 0 0 54 -2,-0.1 2,-0.5 35,-0.1 39,-0.3 -0.002 29.8 -93.8 -99.3-158.7 21.5 6.0 9.4 133 133 A T S S+ 0 0 71 1,-0.4 36,-0.3 36,-0.1 34,-0.0 -0.980 102.5 6.2-131.0 114.1 21.9 3.3 12.0 134 134 A D S S- 0 0 122 33,-0.6 2,-0.4 -2,-0.5 -1,-0.4 0.918 84.4-179.9 70.4 89.9 18.8 2.6 14.1 135 135 A W E -G 167 0D 70 32,-2.2 32,-3.7 -3,-0.2 2,-0.9 -0.960 27.3-152.2-133.6 115.7 16.2 4.8 12.4 136 136 A D E -G 166 0D 99 -2,-0.4 2,-0.4 30,-0.3 30,-0.3 -0.768 25.6-168.4 -86.1 104.5 12.6 5.2 13.3 137 137 A I E -G 165 0D 4 28,-3.3 28,-2.8 -2,-0.9 2,-1.1 -0.787 24.7-122.9-102.2 138.2 10.9 6.1 10.0 138 138 A D + 0 0 77 -2,-0.4 -48,-1.6 26,-0.2 2,-0.3 -0.696 45.0 172.6 -82.5 100.1 7.4 7.5 9.7 139 139 A Y E -E 89 0C 10 -2,-1.1 24,-2.3 24,-0.3 2,-0.3 -0.839 16.1-173.3-113.9 148.3 5.8 5.0 7.4 140 140 A Q E -EF 88 162C 28 -52,-1.3 -52,-2.0 -2,-0.3 2,-0.4 -0.963 6.3-162.6-136.1 154.0 2.2 4.5 6.2 141 141 A L E +EF 87 161C 2 20,-3.2 20,-1.0 -2,-0.3 2,-0.4 -0.972 8.2 179.2-141.9 123.1 0.4 1.9 4.2 142 142 A D E -EF 86 160C 25 -56,-2.9 -56,-1.7 -2,-0.4 2,-0.4 -0.990 5.8-173.9-126.3 128.0 -2.9 2.3 2.5 143 143 A I E -EF 85 159C 1 16,-2.5 16,-3.3 -2,-0.4 2,-0.7 -0.982 13.3-167.6-130.4 130.3 -4.5 -0.5 0.5 144 144 A G E -EF 84 158C 0 -60,-2.1 -60,-2.7 -2,-0.4 2,-0.2 -0.818 16.3-172.6-114.9 90.8 -7.6 -0.4 -1.6 145 145 A L E -EF 83 157C 0 12,-1.4 12,-2.5 -2,-0.7 2,-0.6 -0.528 17.2-131.7 -84.6 151.5 -8.6 -3.9 -2.5 146 146 A T E - F 0 156C 5 -64,-1.7 -65,-0.7 10,-0.3 2,-0.4 -0.902 18.1-171.3-109.1 120.7 -11.4 -4.5 -5.0 147 147 A F E - F 0 155C 0 8,-2.4 8,-2.5 -2,-0.6 2,-0.5 -0.879 13.0-148.6-100.4 141.3 -14.1 -7.0 -4.3 148 148 A D E + F 0 154C 73 -69,-0.5 6,-0.2 -2,-0.4 -2,-0.0 -0.939 19.3 175.5-110.4 133.4 -16.5 -7.9 -7.0 149 149 A I > - 0 0 15 4,-2.1 3,-0.9 -2,-0.5 -2,-0.0 -1.000 37.3-134.0-136.8 139.5 -20.0 -8.8 -6.2 150 150 A P T 3 S+ 0 0 136 0, 0.0 4,-0.1 0, 0.0 -1,-0.1 0.679 102.6 73.3 -63.5 -17.0 -23.0 -9.5 -8.4 151 151 A V T 3 S- 0 0 97 2,-0.1 -3,-0.0 -3,-0.0 0, 0.0 0.921 128.6 -23.1 -62.7 -45.5 -25.0 -7.3 -6.1 152 152 A V S < S- 0 0 68 -3,-0.9 2,-0.2 1,-0.2 -4,-0.1 0.493 87.2-112.1-130.1 -78.0 -23.4 -4.2 -7.4 153 153 A G S S+ 0 0 26 -6,-0.1 -4,-2.1 0, 0.0 2,-0.5 -0.644 71.3 13.2 173.8-112.7 -20.0 -4.5 -9.1 154 154 A D E -F 148 0C 79 -6,-0.2 2,-0.5 -2,-0.2 -6,-0.2 -0.812 52.0-177.0-101.2 126.0 -16.6 -3.3 -8.0 155 155 A I E -F 147 0C 0 -8,-2.5 -8,-2.4 -2,-0.5 2,-0.9 -0.964 8.8-163.1-121.3 114.9 -15.9 -2.1 -4.5 156 156 A T E -F 146 0C 0 -2,-0.5 -10,-0.3 -10,-0.2 -125,-0.1 -0.851 8.3-162.5 -96.1 105.3 -12.5 -0.7 -3.7 157 157 A I E -F 145 0C 24 -12,-2.5 -12,-1.4 -2,-0.9 2,-1.0 -0.791 5.3-154.2 -91.5 107.1 -12.2 -0.7 0.0 158 158 A P E -F 144 0C 45 0, 0.0 2,-0.8 0, 0.0 -14,-0.3 -0.719 10.0-170.1 -85.4 100.7 -9.3 1.6 1.0 159 159 A V E -F 143 0C 21 -16,-3.3 -16,-2.5 -2,-1.0 2,-0.2 -0.841 10.5-155.5 -94.7 110.0 -8.0 0.5 4.3 160 160 A S E -F 142 0C 90 -2,-0.8 2,-0.3 -18,-0.3 -18,-0.2 -0.591 13.2-177.3 -88.9 146.1 -5.6 3.0 5.6 161 161 A T E -F 141 0C 38 -20,-1.0 -20,-3.2 -2,-0.2 2,-0.4 -0.976 4.2-172.3-146.6 127.4 -2.9 2.2 8.0 162 162 A Q E +F 140 0C 169 -2,-0.3 -22,-0.2 -22,-0.2 2,-0.2 -0.949 27.4 117.4-121.4 143.1 -0.4 4.6 9.6 163 163 A G - 0 0 21 -24,-2.3 2,-0.3 -2,-0.4 -24,-0.3 -0.688 50.0 -91.5-164.4-139.6 2.5 3.6 11.8 164 164 A E - 0 0 122 -26,-0.2 2,-0.4 -2,-0.2 -26,-0.2 -0.970 19.6-149.2-161.2 148.6 6.3 3.6 12.0 165 165 A I E -G 137 0D 19 -28,-2.8 -28,-3.3 -2,-0.3 2,-0.7 -0.971 10.9-142.0-126.2 139.4 9.1 1.4 11.1 166 166 A K E -G 136 0D 163 -2,-0.4 -30,-0.3 -30,-0.3 -2,-0.0 -0.911 13.8-159.0-106.1 111.8 12.4 1.0 12.8 167 167 A L E -G 135 0D 1 -32,-3.7 -32,-2.2 -2,-0.7 -33,-0.6 -0.801 23.1-128.7 -93.8 106.3 15.1 0.5 10.3 168 168 A P > - 0 0 45 0, 0.0 2,-2.1 0, 0.0 3,-1.2 -0.050 26.2 -90.2 -64.7 156.9 18.1 -1.1 12.1 169 169 A S T 3 S+ 0 0 81 -36,-0.3 -36,-0.1 1,-0.3 3,-0.0 0.036 94.5 105.7 -48.4 25.3 21.9 -0.1 12.2 170 170 A L T 3 - 0 0 96 -2,-2.1 2,-0.5 1,-0.1 -1,-0.3 0.916 57.4-171.5 -71.6 -42.3 22.7 -2.3 9.1 171 171 A R S < S+ 0 0 130 -3,-1.2 3,-0.4 -39,-0.3 2,-0.4 -0.022 71.5 69.3 72.3 -27.1 22.9 1.0 7.3 172 172 A D S S+ 0 0 103 -2,-0.5 -1,-0.1 1,-0.2 -3,-0.0 -0.583 76.5 79.9-113.7 61.2 23.2 -0.8 4.0 173 173 A F 0 0 14 -2,-0.4 -115,-0.3 -5,-0.1 -1,-0.2 0.156 360.0 360.0-135.8 -1.2 19.7 -2.1 4.0 174 174 A F 0 0 26 -3,-0.4 -114,-0.2 -42,-0.1 -2,-0.1 0.355 360.0 360.0-143.2 360.0 18.5 1.2 2.7