==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 31-MAR-05 1Z96 . COMPND 2 MOLECULE: UBA-DOMAIN PROTEIN MUD1; . SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; . AUTHOR J.-F.TREMPE,N.R.BROWN,E.D.LOWE,M.E.M.NOBLE,C.GORDON, . 73 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4224.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 75.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 11.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 56.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 5.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 2 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 295 A G > 0 0 88 0, 0.0 4,-1.8 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -45.5 31.4 19.6 35.9 2 296 A L H > + 0 0 93 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.904 360.0 52.1 -62.2 -45.7 30.9 23.0 34.2 3 297 A N H > S+ 0 0 128 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.878 107.3 53.2 -62.1 -36.9 27.5 23.8 35.9 4 298 A S H > S+ 0 0 87 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.902 109.8 48.9 -63.3 -38.8 29.0 23.1 39.4 5 299 A K H X S+ 0 0 72 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.897 109.5 51.1 -67.3 -41.3 31.9 25.5 38.6 6 300 A I H X S+ 0 0 28 -4,-2.5 4,-2.8 1,-0.2 -2,-0.2 0.948 109.8 51.3 -57.9 -46.5 29.4 28.2 37.4 7 301 A A H X S+ 0 0 57 -4,-2.5 4,-2.4 1,-0.2 -2,-0.2 0.879 105.8 55.0 -57.3 -40.5 27.5 27.7 40.7 8 302 A Q H X S+ 0 0 40 -4,-2.0 4,-0.6 2,-0.2 -1,-0.2 0.933 111.0 45.2 -57.5 -45.6 30.8 28.2 42.6 9 303 A L H ><>S+ 0 0 0 -4,-2.1 5,-1.7 1,-0.2 3,-1.1 0.907 110.6 52.3 -67.8 -41.1 31.3 31.5 40.9 10 304 A V H ><5S+ 0 0 59 -4,-2.8 3,-2.0 1,-0.2 -1,-0.2 0.889 103.3 60.0 -59.9 -35.3 27.7 32.5 41.5 11 305 A S H 3<5S+ 0 0 65 -4,-2.4 42,-0.3 1,-0.3 -1,-0.2 0.702 99.0 58.0 -65.4 -20.2 28.2 31.7 45.2 12 306 A M T <<5S- 0 0 10 -3,-1.1 -1,-0.3 -4,-0.6 -2,-0.2 0.442 130.3 -95.7 -85.1 -5.7 31.0 34.3 45.3 13 307 A G T < 5S+ 0 0 58 -3,-2.0 -3,-0.2 1,-0.3 -2,-0.1 0.434 82.2 133.3 104.9 1.8 28.5 36.9 44.1 14 308 A F < - 0 0 32 -5,-1.7 -1,-0.3 1,-0.1 -2,-0.1 -0.474 59.3-106.6 -82.3 156.9 29.2 36.8 40.4 15 309 A D > - 0 0 104 -2,-0.1 4,-2.5 1,-0.1 5,-0.2 -0.550 26.6-115.7 -84.7 149.2 26.4 36.7 37.8 16 310 A P H > S+ 0 0 81 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.855 110.3 44.2 -50.1 -49.8 25.7 33.5 35.9 17 311 A L H > S+ 0 0 116 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.932 113.8 48.0 -69.2 -46.0 26.6 34.7 32.4 18 312 A E H > S+ 0 0 74 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.899 114.0 51.0 -58.8 -37.7 29.8 36.5 33.3 19 313 A A H X S+ 0 0 0 -4,-2.5 4,-2.5 2,-0.2 -2,-0.2 0.940 110.7 46.6 -61.5 -50.3 30.7 33.3 35.3 20 314 A A H X S+ 0 0 31 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.895 112.5 50.5 -59.1 -41.8 30.0 31.0 32.3 21 315 A Q H X S+ 0 0 120 -4,-2.6 4,-2.4 2,-0.2 -1,-0.2 0.900 109.7 49.9 -67.9 -39.5 32.0 33.3 30.0 22 316 A A H X S+ 0 0 10 -4,-2.3 4,-2.2 1,-0.2 -2,-0.2 0.920 111.8 48.6 -62.9 -43.6 35.0 33.4 32.3 23 317 A L H <>S+ 0 0 0 -4,-2.5 5,-3.2 2,-0.2 6,-0.4 0.879 109.3 52.8 -65.0 -38.0 34.9 29.6 32.6 24 318 A D H ><5S+ 0 0 126 -4,-2.3 3,-1.6 3,-0.2 -2,-0.2 0.950 111.3 45.9 -58.3 -52.3 34.7 29.3 28.8 25 319 A A H 3<5S+ 0 0 64 -4,-2.4 -2,-0.2 1,-0.3 -1,-0.2 0.891 114.6 49.1 -56.2 -40.8 37.8 31.6 28.3 26 320 A A T ><5S- 0 0 14 -4,-2.2 3,-1.4 -5,-0.2 -1,-0.3 0.362 111.3-122.5 -82.2 2.8 39.5 29.6 31.0 27 321 A N T < 5S- 0 0 153 -3,-1.6 -3,-0.2 1,-0.3 -2,-0.1 0.864 75.4 -47.7 53.4 40.9 38.6 26.3 29.4 28 322 A G T 3 - 0 0 75 -3,-1.4 4,-2.4 -6,-0.4 -1,-0.2 -0.699 32.8-168.9 -83.9 104.4 39.6 26.1 35.0 30 324 A L H > S+ 0 0 4 -2,-0.9 4,-2.8 1,-0.2 5,-0.2 0.869 83.0 55.0 -65.3 -39.5 37.7 27.5 37.9 31 325 A D H > S+ 0 0 26 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.923 112.4 44.1 -63.6 -39.7 40.7 28.9 39.7 32 326 A V H > S+ 0 0 61 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.916 113.4 50.3 -66.9 -45.2 41.6 30.9 36.6 33 327 A A H X S+ 0 0 0 -4,-2.4 4,-1.7 1,-0.2 -2,-0.2 0.907 110.0 50.3 -61.5 -43.8 38.1 32.0 35.9 34 328 A A H X S+ 0 0 0 -4,-2.8 4,-1.7 2,-0.2 3,-0.2 0.944 107.6 53.6 -57.6 -49.4 37.7 33.2 39.5 35 329 A S H < S+ 0 0 51 -4,-1.9 3,-0.3 1,-0.2 -2,-0.2 0.903 107.3 53.1 -54.7 -42.1 41.0 35.2 39.2 36 330 A F H < S+ 0 0 126 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.910 111.6 44.8 -53.8 -48.1 39.5 36.9 36.1 37 331 A L H < 0 0 34 -4,-1.7 -1,-0.2 -3,-0.2 -2,-0.2 0.699 360.0 360.0 -77.2 -21.3 36.4 38.0 37.9 38 332 A L < 0 0 98 -4,-1.7 -3,-0.0 -3,-0.3 15,-0.0 -0.143 360.0 360.0 -63.7 360.0 37.9 39.3 41.1 39 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 40 298 B S > 0 0 64 0, 0.0 4,-1.8 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 149.6 40.3 23.2 41.8 41 299 B K H > + 0 0 79 2,-0.2 4,-2.5 1,-0.2 5,-0.2 0.844 360.0 55.8 -70.9 -33.9 41.9 24.8 44.8 42 300 B I H > S+ 0 0 1 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.943 106.9 50.6 -60.9 -45.5 38.9 27.0 45.4 43 301 B A H > S+ 0 0 36 2,-0.2 4,-2.4 1,-0.2 -2,-0.2 0.908 109.7 51.0 -58.9 -39.8 36.7 23.9 45.6 44 302 B Q H X S+ 0 0 92 -4,-1.8 4,-1.4 2,-0.2 -2,-0.2 0.934 111.5 46.6 -63.1 -46.4 39.2 22.4 48.1 45 303 B L H <>S+ 0 0 0 -4,-2.5 5,-2.1 2,-0.2 4,-0.4 0.891 111.7 50.4 -63.0 -41.9 39.1 25.4 50.3 46 304 B V H ><5S+ 0 0 39 -4,-2.7 3,-1.6 1,-0.2 -1,-0.2 0.911 107.5 55.2 -61.7 -40.9 35.3 25.6 50.2 47 305 B S H 3<5S+ 0 0 96 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.814 102.7 55.7 -61.6 -31.0 35.2 21.9 51.1 48 306 B M T 3<5S- 0 0 122 -4,-1.4 -1,-0.3 -3,-0.2 -2,-0.2 0.580 130.9 -96.1 -78.3 -8.2 37.2 22.7 54.2 49 307 B G T < 5S+ 0 0 65 -3,-1.6 -3,-0.2 -4,-0.4 -2,-0.1 0.451 76.0 140.2 111.8 5.5 34.5 25.3 55.1 50 308 B F < - 0 0 30 -5,-2.1 -1,-0.3 1,-0.1 20,-0.0 -0.454 61.0 -97.9 -79.9 154.2 35.8 28.6 53.8 51 309 B D > - 0 0 71 -2,-0.1 4,-2.9 1,-0.1 5,-0.2 -0.502 33.1-127.9 -66.9 132.1 33.7 31.3 52.2 52 310 B P H > S+ 0 0 20 0, 0.0 4,-2.3 0, 0.0 -40,-0.2 0.890 105.7 42.9 -53.4 -49.4 33.9 30.9 48.3 53 311 B L H > S+ 0 0 47 -42,-0.3 4,-2.6 2,-0.2 5,-0.2 0.938 115.4 49.3 -64.5 -45.5 34.8 34.6 47.6 54 312 B E H > S+ 0 0 104 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.905 110.9 51.9 -58.9 -38.9 37.2 34.8 50.5 55 313 B A H X S+ 0 0 0 -4,-2.9 4,-2.3 2,-0.2 -2,-0.2 0.923 110.5 47.2 -62.8 -45.7 38.8 31.5 49.2 56 314 B A H X S+ 0 0 1 -4,-2.3 4,-2.1 -5,-0.2 -2,-0.2 0.900 113.9 47.9 -60.1 -43.2 39.2 32.9 45.7 57 315 B Q H X S+ 0 0 93 -4,-2.6 4,-2.5 1,-0.2 -2,-0.2 0.910 112.6 48.1 -68.3 -42.3 40.7 36.2 47.1 58 316 B A H X S+ 0 0 8 -4,-2.7 4,-2.2 -5,-0.2 -1,-0.2 0.876 109.9 52.1 -65.7 -38.0 43.1 34.4 49.3 59 317 B L H <>S+ 0 0 8 -4,-2.3 5,-2.8 2,-0.2 6,-0.4 0.926 110.5 48.1 -66.8 -39.6 44.2 32.0 46.6 60 318 B D H ><5S+ 0 0 84 -4,-2.1 3,-1.8 1,-0.2 -2,-0.2 0.951 111.9 49.5 -61.7 -48.4 44.9 35.0 44.3 61 319 B A H 3<5S+ 0 0 72 -4,-2.5 -2,-0.2 1,-0.3 -1,-0.2 0.880 111.5 50.9 -52.5 -39.9 46.8 36.7 47.2 62 320 B A T ><5S- 0 0 7 -4,-2.2 3,-1.6 -5,-0.1 -1,-0.3 0.256 112.6-119.0 -85.3 8.7 48.8 33.4 47.7 63 321 B N T < 5S- 0 0 145 -3,-1.8 -3,-0.2 1,-0.3 -2,-0.1 0.863 76.3 -50.3 52.4 36.6 49.7 33.1 44.0 64 322 B G T 3 - 0 0 82 -3,-1.6 4,-2.4 -6,-0.4 -1,-0.2 -0.746 38.1-160.9 -86.4 115.4 49.4 28.1 46.8 66 324 B L H > S+ 0 0 46 -2,-0.7 4,-2.4 2,-0.2 5,-0.2 0.888 89.0 50.3 -61.4 -42.9 46.6 26.3 48.6 67 325 B D H > S+ 0 0 121 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.926 112.7 45.6 -65.0 -44.4 48.6 26.0 51.9 68 326 B V H > S+ 0 0 44 2,-0.2 4,-2.1 1,-0.2 -2,-0.2 0.922 111.8 52.8 -62.5 -44.3 49.4 29.7 52.0 69 327 B A H X S+ 0 0 0 -4,-2.4 4,-1.4 1,-0.2 -2,-0.2 0.924 107.7 50.5 -60.4 -46.0 45.8 30.6 51.1 70 328 B A H X S+ 0 0 15 -4,-2.4 4,-0.9 1,-0.2 3,-0.4 0.920 108.6 53.1 -59.2 -40.8 44.4 28.6 53.9 71 329 B S H >< S+ 0 0 71 -4,-1.9 3,-0.7 1,-0.2 -1,-0.2 0.893 106.2 53.1 -63.1 -37.4 46.8 30.3 56.3 72 330 B F H 3< S+ 0 0 118 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.812 110.2 48.7 -66.0 -28.7 45.6 33.7 55.2 73 331 B L H 3< 0 0 39 -4,-1.4 -1,-0.2 -3,-0.4 -2,-0.2 0.568 360.0 360.0 -87.7 -11.4 42.0 32.6 55.9 74 332 B L << 0 0 179 -4,-0.9 -1,-0.2 -3,-0.7 -2,-0.2 0.437 360.0 360.0-109.2 360.0 42.7 31.3 59.4