==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LEUCINE ZIPPER 30-OCT-96 1ZIK . COMPND 2 MOLECULE: GENERAL CONTROL PROTEIN GCN4; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR L.GONZALEZ JUNIOR,D.N.WOOLFSON,T.ALBER . 60 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4789.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 88.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 49 81.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R > 0 0 160 0, 0.0 4,-1.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -31.5 38.4 14.9 14.7 2 2 A M H > + 0 0 75 2,-0.2 4,-2.5 3,-0.1 3,-0.1 0.912 360.0 46.3 -77.6 -39.5 37.1 18.1 16.1 3 3 A K H > S+ 0 0 129 1,-0.2 4,-3.1 2,-0.2 5,-0.3 0.887 109.8 54.6 -62.1 -40.2 37.4 19.5 12.5 4 4 A Q H > S+ 0 0 143 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.825 109.3 46.9 -65.4 -31.9 35.8 16.3 11.1 5 5 A L H X S+ 0 0 24 -4,-1.1 4,-2.0 2,-0.2 -1,-0.2 0.891 112.8 50.2 -76.1 -38.5 32.8 16.8 13.4 6 6 A E H X S+ 0 0 89 -4,-2.5 4,-2.4 2,-0.2 3,-0.3 0.959 110.6 47.7 -59.9 -54.0 32.6 20.5 12.4 7 7 A D H X S+ 0 0 69 -4,-3.1 4,-2.6 1,-0.2 -1,-0.2 0.836 110.6 55.8 -53.7 -36.0 32.8 19.7 8.7 8 8 A K H X S+ 0 0 80 -4,-1.1 4,-2.2 -5,-0.3 -1,-0.2 0.894 105.1 48.2 -67.4 -41.3 30.1 17.1 9.3 9 9 A V H X S+ 0 0 24 -4,-2.0 4,-2.0 -3,-0.3 -2,-0.2 0.934 112.2 52.2 -64.8 -42.3 27.7 19.5 10.9 10 10 A E H X S+ 0 0 123 -4,-2.4 4,-2.6 2,-0.2 3,-0.3 0.963 109.0 49.3 -55.3 -52.7 28.3 21.9 7.9 11 11 A E H X S+ 0 0 88 -4,-2.6 4,-2.9 1,-0.3 5,-0.3 0.920 112.3 46.9 -52.9 -50.7 27.6 19.2 5.4 12 12 A L H X S+ 0 0 4 -4,-2.2 4,-1.8 1,-0.2 -1,-0.3 0.778 108.2 55.9 -67.6 -28.1 24.4 18.2 7.0 13 13 A L H X S+ 0 0 62 -4,-2.0 4,-2.7 -3,-0.3 -1,-0.2 0.944 109.7 47.0 -65.7 -48.1 23.3 21.8 7.3 14 14 A S H X S+ 0 0 79 -4,-2.6 4,-2.4 2,-0.2 3,-0.3 0.978 113.3 46.9 -53.4 -61.8 23.7 22.1 3.6 15 15 A K H X S+ 0 0 96 -4,-2.9 4,-2.3 1,-0.3 -1,-0.2 0.941 111.6 53.2 -52.2 -40.3 21.8 19.0 2.8 16 16 A K H X S+ 0 0 32 -4,-1.8 4,-1.9 -5,-0.3 -1,-0.3 0.944 106.3 51.1 -63.0 -39.4 19.2 20.1 5.2 17 17 A Y H X S+ 0 0 125 -4,-2.7 4,-2.2 -3,-0.3 -1,-0.2 0.902 109.1 52.1 -63.3 -36.6 18.9 23.4 3.4 18 18 A H H X S+ 0 0 114 -4,-2.4 4,-2.5 1,-0.2 5,-0.2 0.935 108.0 51.5 -60.7 -49.6 18.4 21.7 0.1 19 19 A L H X S+ 0 0 18 -4,-2.3 4,-1.6 -5,-0.2 -1,-0.2 0.847 110.0 48.4 -60.2 -38.0 15.7 19.5 1.4 20 20 A E H X S+ 0 0 79 -4,-1.9 4,-1.7 -5,-0.2 -1,-0.2 0.878 108.9 52.8 -74.3 -34.5 13.8 22.4 2.8 21 21 A N H X S+ 0 0 110 -4,-2.2 4,-2.2 1,-0.2 3,-0.4 0.970 110.5 49.4 -60.6 -50.1 14.1 24.4 -0.5 22 22 A E H X S+ 0 0 49 -4,-2.5 4,-2.1 1,-0.3 5,-0.2 0.893 108.1 52.3 -55.4 -42.8 12.6 21.3 -2.3 23 23 A V H X S+ 0 0 9 -4,-1.6 4,-2.3 2,-0.2 -1,-0.3 0.873 107.2 53.6 -65.0 -33.9 9.8 20.9 0.1 24 24 A A H < S+ 0 0 36 -4,-1.7 4,-0.4 -3,-0.4 -2,-0.2 0.942 109.6 48.1 -60.7 -49.1 8.9 24.6 -0.5 25 25 A R H < S+ 0 0 104 -4,-2.2 3,-0.4 1,-0.2 -1,-0.2 0.828 113.9 44.6 -58.0 -44.1 8.8 24.1 -4.1 26 26 A L H >< S+ 0 0 3 -4,-2.1 3,-1.0 1,-0.2 -1,-0.2 0.787 107.8 59.8 -74.7 -31.0 6.6 20.9 -3.8 27 27 A K T 3< S+ 0 0 121 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.614 103.3 53.5 -71.3 -11.7 4.5 22.7 -1.3 28 28 A K T 3 S+ 0 0 169 -4,-0.4 -1,-0.3 -3,-0.4 -2,-0.2 0.569 103.2 54.2 -99.7 -8.3 3.8 25.2 -4.1 29 29 A L < 0 0 102 -3,-1.0 -2,-0.2 -4,-0.2 -1,-0.2 0.180 360.0 360.0-102.2 6.5 2.7 22.6 -6.6 30 30 A V 0 0 112 -3,-0.2 -2,-0.1 -4,-0.1 -1,-0.1 0.918 360.0 360.0 -81.3 360.0 0.1 21.3 -4.2 31 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 32 1 B R >> 0 0 163 0, 0.0 4,-2.4 0, 0.0 3,-0.6 0.000 360.0 360.0 360.0 177.3 32.9 20.6 22.7 33 2 B M H 3> + 0 0 40 1,-0.3 4,-2.3 2,-0.2 5,-0.2 0.889 360.0 45.0 -39.9 -53.7 33.3 17.0 21.2 34 3 B K H 3> S+ 0 0 125 2,-0.2 4,-1.9 1,-0.2 -1,-0.3 0.827 111.1 51.6 -64.4 -36.5 30.1 15.8 22.7 35 4 B Q H <> S+ 0 0 109 -3,-0.6 4,-2.3 2,-0.2 -1,-0.2 0.944 110.6 49.2 -64.1 -48.0 28.0 18.9 21.7 36 5 B L H X S+ 0 0 30 -4,-2.4 4,-2.5 2,-0.2 -2,-0.2 0.905 110.1 52.2 -56.4 -44.7 29.2 18.5 18.1 37 6 B E H X S+ 0 0 57 -4,-2.3 4,-1.8 -5,-0.3 -1,-0.2 0.867 110.2 48.4 -62.3 -35.9 28.2 14.8 18.3 38 7 B D H X S+ 0 0 86 -4,-1.9 4,-1.7 2,-0.2 -1,-0.3 0.857 108.5 52.9 -71.0 -35.5 24.9 15.8 19.5 39 8 B K H X S+ 0 0 86 -4,-2.3 4,-2.7 2,-0.2 3,-0.3 0.976 108.2 51.6 -64.1 -53.5 24.4 18.5 16.7 40 9 B V H X S+ 0 0 25 -4,-2.5 4,-2.8 1,-0.2 5,-0.2 0.929 110.8 48.2 -48.5 -50.9 25.3 15.8 14.0 41 10 B E H X S+ 0 0 127 -4,-1.8 4,-1.5 1,-0.2 -1,-0.2 0.868 113.2 47.1 -62.0 -36.0 22.6 13.4 15.5 42 11 B E H X S+ 0 0 81 -4,-1.7 4,-1.5 -3,-0.3 -1,-0.2 0.889 112.9 48.0 -72.6 -37.6 20.0 16.0 15.6 43 12 B L H X S+ 0 0 5 -4,-2.7 4,-2.6 1,-0.2 -2,-0.2 0.900 109.3 53.7 -69.9 -41.1 20.7 17.2 12.1 44 13 B L H X S+ 0 0 61 -4,-2.8 4,-2.3 -5,-0.3 -1,-0.2 0.871 106.1 53.0 -62.1 -35.8 20.6 13.7 10.7 45 14 B S H X S+ 0 0 83 -4,-1.5 4,-1.8 -5,-0.2 -1,-0.2 0.912 109.9 48.8 -64.6 -39.0 17.2 13.1 12.3 46 15 B K H X S+ 0 0 82 -4,-1.5 4,-2.6 2,-0.2 5,-0.2 0.939 107.3 55.0 -64.2 -46.8 16.0 16.3 10.5 47 16 B K H X S+ 0 0 21 -4,-2.6 4,-3.1 1,-0.2 5,-0.2 0.936 108.9 46.8 -52.5 -50.8 17.4 15.2 7.3 48 17 B Y H X S+ 0 0 116 -4,-2.3 4,-2.2 1,-0.2 -1,-0.2 0.859 110.5 53.3 -63.3 -34.4 15.5 11.9 7.4 49 18 B H H X S+ 0 0 105 -4,-1.8 4,-1.3 2,-0.2 -1,-0.2 0.877 112.6 44.8 -65.8 -39.6 12.3 13.7 8.4 50 19 B L H X S+ 0 0 12 -4,-2.6 4,-3.2 2,-0.2 -2,-0.2 0.906 110.0 53.3 -71.1 -46.8 12.7 16.0 5.4 51 20 B E H X S+ 0 0 76 -4,-3.1 4,-2.2 1,-0.2 -2,-0.2 0.935 111.8 46.7 -57.5 -41.6 13.6 13.2 3.0 52 21 B N H X S+ 0 0 93 -4,-2.2 4,-1.3 -5,-0.2 -1,-0.2 0.893 112.9 48.6 -68.7 -34.3 10.4 11.3 4.0 53 22 B E H X S+ 0 0 24 -4,-1.3 4,-2.2 1,-0.2 3,-0.4 0.945 110.2 53.0 -67.9 -41.5 8.3 14.4 3.7 54 23 B V H X S+ 0 0 17 -4,-3.2 4,-2.2 1,-0.2 5,-0.2 0.887 106.6 51.2 -57.4 -44.7 9.8 15.0 0.4 55 24 B A H X S+ 0 0 60 -4,-2.2 4,-1.1 -5,-0.2 -1,-0.2 0.771 110.0 51.6 -65.0 -29.4 8.9 11.5 -0.8 56 25 B R H X S+ 0 0 146 -4,-1.3 4,-1.6 -3,-0.4 -2,-0.2 0.901 107.8 49.4 -75.3 -46.2 5.4 12.0 0.3 57 26 B L H >X S+ 0 0 22 -4,-2.2 4,-1.2 1,-0.2 3,-0.5 0.956 109.6 51.0 -60.0 -52.2 4.8 15.3 -1.5 58 27 B K H >< S+ 0 0 109 -4,-2.2 3,-0.8 1,-0.3 -1,-0.2 0.908 106.0 56.1 -53.8 -41.7 6.2 14.0 -4.8 59 28 B K H 3< S+ 0 0 193 -4,-1.1 -1,-0.3 1,-0.2 -2,-0.2 0.922 109.6 47.4 -56.4 -39.5 3.8 11.1 -4.4 60 29 B L H << 0 0 127 -4,-1.6 -1,-0.2 -3,-0.5 -2,-0.2 0.620 360.0 360.0 -76.1 -17.4 1.0 13.6 -4.1 61 30 B V << 0 0 80 -4,-1.2 -3,-0.2 -3,-0.8 -2,-0.1 0.291 360.0 360.0-138.9 360.0 2.1 15.8 -7.2