==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 25-FEB-09 2ZZT . COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; . AUTHOR T.HIGUCHI,M.HATTORI,Y.TANAKA,R.ISHITANI,O.NUREKI . 83 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5562.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 58 69.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 9 10.8 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 9.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 33.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 209 A X 0 0 159 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 141.2 -4.4 -18.5 0.8 2 210 A K > - 0 0 123 1,-0.0 4,-2.0 0, 0.0 3,-0.5 -0.967 360.0-101.8-143.2 154.0 -0.9 -17.6 -0.6 3 211 A R H > S+ 0 0 86 -2,-0.3 4,-1.5 1,-0.2 5,-0.1 0.737 119.4 56.5 -47.4 -26.1 1.0 -14.3 -1.2 4 212 A T H > S+ 0 0 80 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.945 103.9 45.7 -79.8 -50.8 0.1 -14.6 -4.8 5 213 A E H > S+ 0 0 24 -3,-0.5 4,-2.8 1,-0.2 5,-0.2 0.912 111.7 58.1 -58.5 -40.0 -3.7 -14.9 -4.7 6 214 A L H X S+ 0 0 88 -4,-2.0 4,-2.9 1,-0.2 -1,-0.2 0.897 102.6 50.5 -54.0 -47.5 -3.5 -12.0 -2.2 7 215 A D H X S+ 0 0 87 -4,-1.5 4,-1.7 -5,-0.2 -1,-0.2 0.945 113.0 48.2 -61.2 -44.7 -1.7 -9.7 -4.7 8 216 A X H >X S+ 0 0 3 -4,-2.0 4,-1.8 2,-0.2 3,-1.5 0.988 110.6 47.9 -55.7 -68.1 -4.4 -10.5 -7.3 9 217 A Y H 3X S+ 0 0 41 -4,-2.8 4,-2.1 1,-0.3 5,-0.3 0.915 109.5 56.5 -37.6 -54.8 -7.3 -9.9 -5.0 10 218 A D H 3X S+ 0 0 79 -4,-2.9 4,-1.5 -5,-0.2 -1,-0.3 0.861 108.2 47.5 -47.0 -41.6 -5.7 -6.7 -4.0 11 219 A D H XX S+ 0 0 28 -4,-1.7 4,-2.0 -3,-1.5 3,-0.7 0.989 107.0 53.6 -69.6 -59.2 -5.6 -5.6 -7.6 12 220 A I H >X S+ 0 0 1 -4,-1.8 4,-2.2 1,-0.3 3,-0.7 0.901 112.6 45.2 -33.9 -59.3 -9.1 -6.4 -8.5 13 221 A F H 3X S+ 0 0 83 -4,-2.1 4,-3.5 1,-0.3 -1,-0.3 0.835 107.1 59.1 -61.5 -34.1 -10.4 -4.4 -5.5 14 222 A A H << S+ 0 0 38 -4,-1.5 4,-0.3 -3,-0.7 -1,-0.3 0.850 108.1 45.3 -61.8 -37.9 -8.1 -1.5 -6.4 15 223 A V H X< S+ 0 0 2 -4,-2.0 3,-1.3 -3,-0.7 -2,-0.2 0.893 111.9 54.4 -69.5 -40.8 -9.7 -1.3 -9.8 16 224 A L H >< S+ 0 0 8 -4,-2.2 3,-3.6 -5,-0.3 -2,-0.2 0.954 97.3 60.4 -58.5 -55.4 -13.1 -1.6 -8.0 17 225 A E T 3< S+ 0 0 177 -4,-3.5 -1,-0.3 1,-0.3 -2,-0.2 0.694 92.3 73.7 -46.3 -17.7 -12.4 1.3 -5.7 18 226 A R T < S+ 0 0 145 -3,-1.3 -1,-0.3 -4,-0.3 -2,-0.2 0.519 86.1 69.8 -79.6 -3.8 -12.1 3.2 -9.0 19 227 A F < - 0 0 30 -3,-3.6 3,-0.4 1,-0.1 -1,-0.1 -0.974 60.9-168.7-118.5 126.2 -15.9 3.1 -9.5 20 228 A P S S+ 0 0 106 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.819 87.4 55.9 -81.9 -38.5 -18.0 5.3 -7.2 21 229 A N S S+ 0 0 74 2,-0.0 2,-0.3 24,-0.0 25,-0.3 0.596 91.3 95.1 -71.1 -10.8 -21.3 3.9 -8.1 22 230 A V + 0 0 16 -3,-0.4 2,-0.3 -6,-0.2 23,-0.1 -0.656 54.1 172.7 -91.1 138.2 -20.0 0.4 -7.2 23 231 A H E +A 44 0A 94 21,-1.4 21,-2.5 -2,-0.3 -2,-0.0 -0.940 43.8 7.2-144.1 159.5 -20.7 -1.1 -3.7 24 232 A N E - 0 0 95 -2,-0.3 2,-0.2 19,-0.2 -1,-0.1 0.787 62.2-169.6 34.5 62.2 -20.4 -4.2 -1.5 25 233 A P E + 0 0 38 0, 0.0 2,-0.3 0, 0.0 18,-0.2 -0.546 22.5 145.0 -76.8 142.0 -18.4 -6.5 -3.7 26 234 A H E +A 42 0A 63 16,-1.8 16,-1.4 -2,-0.2 3,-0.1 -0.949 41.1 54.8-167.4 170.4 -18.3 -9.9 -2.3 27 235 A R E + 0 0 188 -2,-0.3 2,-0.7 1,-0.2 -1,-0.1 0.871 68.8 169.4 55.0 37.2 -18.3 -13.5 -3.4 28 236 A V E - 0 0 15 13,-0.2 2,-0.3 -3,-0.1 -1,-0.2 -0.745 9.5-178.9 -81.1 118.1 -15.3 -12.6 -5.5 29 237 A R E -A 40 0A 161 11,-2.2 11,-2.0 -2,-0.7 2,-0.3 -0.890 16.2-150.0-125.4 152.0 -13.8 -15.8 -6.8 30 238 A I E -A 39 0A 46 -2,-0.3 2,-0.3 9,-0.2 9,-0.2 -0.822 5.8-168.3-117.5 153.5 -10.8 -16.8 -8.9 31 239 A R E -A 38 0A 80 7,-1.2 7,-2.8 -2,-0.3 2,-0.6 -0.994 12.2-148.6-139.5 141.2 -10.1 -19.6 -11.3 32 240 A R + 0 0 170 -2,-0.3 2,-0.6 5,-0.2 -2,-0.0 -0.753 24.6 164.7-114.2 86.7 -6.7 -20.6 -12.7 33 241 A V S S- 0 0 56 -2,-0.6 2,-0.4 2,-0.1 -2,-0.1 -0.891 73.5 -45.4-102.3 123.4 -7.0 -22.1 -16.2 34 242 A G 0 0 78 -2,-0.6 0, 0.0 3,-0.0 0, 0.0 -0.444 360.0 360.0 51.8-113.3 -3.7 -22.1 -18.0 35 243 A T 0 0 123 -2,-0.4 -2,-0.1 2,-0.1 -3,-0.0 -0.887 360.0 360.0-151.0 360.0 -2.5 -18.6 -17.2 36 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 37 245 A Y 0 0 44 0, 0.0 36,-2.8 0, 0.0 37,-0.7 0.000 360.0 360.0 360.0 166.9 -7.0 -16.4 -14.4 38 246 A F E -Ab 31 74A 71 -7,-2.8 -7,-1.2 35,-0.2 2,-0.3 -0.963 360.0-162.3-118.1 126.3 -10.8 -15.9 -14.5 39 247 A I E -Ab 30 75A 0 35,-2.0 37,-2.1 -2,-0.5 2,-0.3 -0.806 7.9-178.1-109.7 146.1 -12.5 -13.7 -12.0 40 248 A E E +Ab 29 76A 93 -11,-2.0 -11,-2.2 -2,-0.3 2,-0.3 -0.975 14.8 164.7-139.0 146.8 -16.1 -13.7 -11.2 41 249 A X E - b 0 77A 1 35,-2.2 37,-3.1 -2,-0.3 2,-0.5 -0.998 32.8-124.5-166.3 170.9 -17.8 -11.4 -8.8 42 250 A D E +Ab 26 78A 28 -16,-1.4 -16,-1.8 -2,-0.3 2,-0.3 -0.978 26.3 175.4-128.5 122.0 -20.8 -9.8 -7.3 43 251 A I E - b 0 79A 0 35,-2.7 37,-1.8 -2,-0.5 2,-0.4 -0.883 19.9-134.9-123.2 159.4 -21.4 -6.1 -6.9 44 252 A E E +Ab 23 80A 14 -21,-2.5 -21,-1.4 -2,-0.3 2,-0.3 -0.893 23.4 175.3-112.2 142.7 -24.3 -4.0 -5.7 45 253 A V E - b 0 81A 8 35,-3.2 37,-1.2 -2,-0.4 2,-0.2 -0.924 43.8 -60.6-139.2 169.0 -25.8 -0.9 -7.2 46 254 A D > - 0 0 92 -25,-0.3 3,-5.6 -2,-0.3 -25,-0.0 -0.271 37.3-140.7 -47.9 105.6 -28.7 1.6 -6.8 47 255 A G T 3 S+ 0 0 55 1,-0.3 -1,-0.2 -2,-0.2 -2,-0.0 0.896 107.9 57.9 -28.5 -53.4 -32.0 -0.2 -7.1 48 256 A K T 3 S+ 0 0 189 2,-0.1 -1,-0.3 0, 0.0 2,-0.2 0.397 84.0 114.8 -66.1 7.1 -33.0 2.9 -9.0 49 257 A X S < S- 0 0 41 -3,-5.6 2,-0.4 1,-0.1 -4,-0.1 -0.550 72.7-112.1 -82.3 147.3 -30.1 2.3 -11.5 50 258 A S >> - 0 0 48 -2,-0.2 4,-3.0 1,-0.1 3,-1.0 -0.591 13.3-132.0 -79.5 133.0 -31.1 1.6 -15.1 51 259 A V H 3> S+ 0 0 128 -2,-0.4 4,-2.8 1,-0.3 -1,-0.1 0.887 109.3 56.0 -43.9 -44.6 -30.3 -1.8 -16.3 52 260 A K H 3> S+ 0 0 163 2,-0.2 4,-2.2 1,-0.2 -1,-0.3 0.853 109.9 46.0 -64.4 -30.9 -28.7 -0.2 -19.4 53 261 A D H <> S+ 0 0 81 -3,-1.0 4,-3.0 2,-0.2 -2,-0.2 0.978 109.8 51.0 -74.0 -55.8 -26.4 1.7 -17.2 54 262 A A H X S+ 0 0 15 -4,-3.0 4,-2.0 1,-0.2 5,-0.3 0.884 108.9 55.0 -50.1 -36.8 -25.5 -1.1 -15.0 55 263 A H H X S+ 0 0 127 -4,-2.8 4,-1.7 -5,-0.3 3,-0.5 0.996 108.5 45.9 -58.3 -61.9 -24.7 -2.9 -18.2 56 264 A E H X S+ 0 0 55 -4,-2.2 4,-1.9 1,-0.2 -2,-0.2 0.831 109.8 59.5 -43.6 -39.6 -22.4 -0.2 -19.4 57 265 A L H X S+ 0 0 17 -4,-3.0 4,-2.1 1,-0.2 -1,-0.2 0.956 103.8 45.4 -59.0 -54.9 -20.9 -0.2 -15.9 58 266 A T H X S+ 0 0 24 -4,-2.0 4,-2.5 -3,-0.5 -1,-0.2 0.805 108.2 60.3 -64.0 -27.6 -19.7 -3.8 -15.8 59 267 A V H X S+ 0 0 65 -4,-1.7 4,-3.0 -5,-0.3 -1,-0.2 0.957 105.9 45.3 -65.1 -47.2 -18.3 -3.4 -19.2 60 268 A K H X S+ 0 0 42 -4,-1.9 4,-3.7 -3,-0.2 5,-0.2 0.912 110.9 55.0 -63.9 -38.0 -16.0 -0.7 -18.1 61 269 A I H X S+ 0 0 1 -4,-2.1 4,-3.8 2,-0.2 -1,-0.2 0.943 110.5 44.7 -58.7 -49.5 -15.0 -2.7 -15.1 62 270 A R H X S+ 0 0 107 -4,-2.5 4,-3.8 2,-0.2 5,-0.3 0.977 113.7 50.5 -57.1 -54.9 -14.0 -5.6 -17.2 63 271 A K H X S+ 0 0 54 -4,-3.0 4,-2.6 1,-0.2 -2,-0.2 0.927 114.8 44.0 -47.5 -52.7 -12.2 -3.3 -19.6 64 272 A E H X S+ 0 0 64 -4,-3.7 4,-2.8 2,-0.2 -1,-0.2 0.937 113.1 50.4 -57.6 -54.6 -10.4 -1.8 -16.7 65 273 A X H X S+ 0 0 2 -4,-3.8 4,-1.8 1,-0.2 -2,-0.2 0.958 111.4 49.1 -44.3 -59.8 -9.8 -5.2 -15.1 66 274 A L H < S+ 0 0 71 -4,-3.8 -1,-0.2 1,-0.2 -2,-0.2 0.874 111.6 50.0 -50.7 -44.9 -8.4 -6.4 -18.4 67 275 A K H < S+ 0 0 75 -4,-2.6 -1,-0.2 -5,-0.3 -2,-0.2 0.980 107.8 51.8 -59.4 -56.6 -6.2 -3.3 -18.7 68 276 A R H < S+ 0 0 118 -4,-2.8 2,-0.4 1,-0.1 -2,-0.2 0.777 117.6 30.0 -57.5 -37.2 -4.6 -3.5 -15.2 69 277 A R >< - 0 0 32 -4,-1.8 3,-0.8 -5,-0.2 -1,-0.1 -0.987 54.1-162.0-130.0 129.9 -3.5 -7.2 -15.4 70 278 A D T 3 S+ 0 0 145 -2,-0.4 -1,-0.1 1,-0.2 -2,-0.1 0.750 90.4 69.4 -71.4 -23.9 -2.4 -9.2 -18.4 71 279 A D T 3 S+ 0 0 40 2,-0.0 2,-0.5 -33,-0.0 -1,-0.2 0.643 78.5 95.1 -70.0 -17.3 -2.9 -12.4 -16.4 72 280 A I < + 0 0 8 -3,-0.8 -34,-0.2 -6,-0.2 3,-0.1 -0.657 45.3 173.7 -83.7 126.1 -6.7 -11.9 -16.4 73 281 A E + 0 0 119 -36,-2.8 2,-0.3 -2,-0.5 -35,-0.2 0.896 64.1 1.8 -92.9 -59.8 -8.5 -13.7 -19.2 74 282 A D E -b 38 0A 64 -37,-0.7 -35,-2.0 2,-0.0 2,-0.4 -0.966 55.9-157.1-137.7 156.7 -12.1 -13.1 -18.5 75 283 A V E -b 39 0A 2 -2,-0.3 2,-0.4 -37,-0.2 -35,-0.2 -0.989 4.4-170.1-133.7 127.9 -14.3 -11.3 -15.9 76 284 A T E -b 40 0A 47 -37,-2.1 -35,-2.2 -2,-0.4 2,-0.5 -0.971 6.2-173.3-122.0 130.1 -17.9 -12.0 -14.9 77 285 A I E -b 41 0A 28 -2,-0.4 2,-0.4 -37,-0.2 -35,-0.2 -0.973 7.7-161.7-128.2 122.9 -19.9 -9.6 -12.7 78 286 A H E -b 42 0A 87 -37,-3.1 -35,-2.7 -2,-0.5 2,-0.4 -0.800 17.0-145.4 -99.2 141.9 -23.3 -10.1 -11.3 79 287 A V E +b 43 0A 60 -2,-0.4 -35,-0.2 -37,-0.2 -37,-0.0 -0.861 19.8 172.0-117.0 140.8 -25.3 -7.1 -10.1 80 288 A E E -b 44 0A 41 -37,-1.8 -35,-3.2 -2,-0.4 2,-0.3 -0.959 40.5 -94.5-140.2 160.0 -27.7 -6.6 -7.3 81 289 A P E > -b 45 0A 73 0, 0.0 3,-2.4 0, 0.0 -35,-0.2 -0.585 59.0 -97.9 -66.8 129.4 -29.6 -4.0 -5.4 82 290 A L T 3 S+ 0 0 79 -37,-1.2 -35,-0.1 -2,-0.3 -58,-0.0 -0.213 118.4 47.3 -42.9 143.6 -27.6 -3.0 -2.4 83 291 A G T 3 0 0 75 1,-0.2 -1,-0.3 -3,-0.1 -39,-0.0 0.189 360.0 360.0 97.8 -15.4 -29.1 -4.9 0.4 84 292 A N < 0 0 84 -3,-2.4 -2,-0.2 -4,-0.0 -1,-0.2 0.341 360.0 360.0 121.9 360.0 -29.0 -8.1 -1.7