BMRB Entry 6898
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR6898
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Title: NMR structure of the peptide linked to the genome (VPg) of poliovirus PubMed: 16540201
Deposition date: 2005-11-10 Original release date: 2007-02-06
Authors: Schein, C.; Oezguen, N.
Citation: Schein, C.; Oezguen, N.; Volk, D.; Garimella, R.; Paul, A.; Braun, W.. "NMR structure of the viral peptide linked to the genome (VPg) of poliovirus" Peptides 27, 1676-1684 (2006).
Assembly members:
Genome linked protein VPg, polymer, 22 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
Genome linked protein VPg: GAYTGLPNKKPNVPTIRTAK
VQ
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 276 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | Genome linked protein VPg | 1 |
Entities:
Entity 1, Genome linked protein VPg 22 residues - Formula weight is not available
| 1 | GLY | ALA | TYR | THR | GLY | LEU | PRO | ASN | LYS | LYS | ||||
| 2 | PRO | ASN | VAL | PRO | THR | ILE | ARG | THR | ALA | LYS | ||||
| 3 | VAL | GLN |
Samples:
sample_1: Genome linked protein VPg 2.78 mM; sodium phosphate buffer 0.01 M; deuterated Trimethylamine oxide 1 M; D2O 10%; H2O 90%
sample_2: Genome linked protein VPg 3.7 mM; sodium phosphate buffer 0.01 M; D2O 10%; H2O 90%
sample_cond_1: ionic strength: 10 mM; pH: 7.2; pressure: 1 atm; temperature: 283 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D TOCSY | not available | not available | not available |
| 2D NOESY | not available | not available | not available |
| DQF-COSY | not available | not available | not available |
Software:
NOAH v2.0 - structure solution
DIAMOD v2.2 - refinement, structure solution
FELIX - data analysis
NMR spectrometers:
- Varian UNITYplus 600 MHz