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Biological Magnetic Resonance Data BankA Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules |
Member of
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BMRB Database Search
Field: NMR-STAR 3.1 tag or tags (fields) to search. Click on the 
icon to see the tag definition in
the NMR-STAR dictionary.
- When searching for external database IDs, choose a database from the list.
- Title search looks in both Entry title and Citation Title
- Author name search looks for family name in Entry and Citation sections
- Similarly, molecule name is searched for in the Molecular assembly, Molecular entity, and Chemical compound sections.
Value to search for: you can use POSIX regular expressions supported by PostgreSQL database engine (see the link for details). For a quick example, when searching for Entry ID:
| Search term | Result |
|---|---|
| . | list of all BMRB IDs in the database (dot stands for "any character") |
| 15.* | list of BMRB IDs with "15" anywhere in the number (asterisk stands for "zero or more of the preceding character") |
| ^15.$ | list of BMRB IDs between 150 and 159 (caret and dollar sign stand for start and end of the match resp.) |
| ^15[0-3]$ | list of BMRB IDs between 150 and 153 (ranges are specified in square brackets) |
| ^15(0|6)$ | BMRB IDs 150 and 156 (use vertical pipe for "or" and parentheses for grouping) |
Display checkbox: select the fields to include in the output.
Output: you can select whether to render the output as an HTML table, or a comma-delimited table suitable for importing into spreadsheet programs. If you'd like to see the CSV table in the browser, and your browser opens the "Save As" dialog (or fires up a spreadsheet opens the table in that) instead, tick the "inline" checkbox.
Note that there is a small number of BMRB entries that have not been converted to NMR-STAR 3.1 yet. They are not loaded into the NMR-STAR 3.1 relational database and so the search will not find them. BMRB entries available only in NMR-STAR 2.1 format.